Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
pknDPutative serine/threonine-protein kinase. (473 aa)    
Predicted Functional Partners:
prpB8
Putative magnesium or manganese-dependent protein phosphatase.
 
 
 0.835
SACE_0048
Protein serine/threonine phosphatases.
 
 
 0.834
SACE_3238
FHA domain containing protein.
 
 
 
 0.759
SACE_3845
FHA domain containing protein.
 
 
 
 0.687
pknB
Serine/threonine protein kinase.
 
 
0.538
SACE_0049
FHA domain containing protein.
 
 
 
 0.463
SACE_7381
Integral membrane protein MviN.
 
  
 0.437
SACE_0050
FHA domain containing protein.
 
 
 
 0.432
prcA
20S proteasome alpha-subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
      
 0.412
SACE_1710
Putative serine/threonine protein kinase.
 
 
0.410
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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