STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3205Transmembrane efflux protein. (421 aa)    
Predicted Functional Partners:
cmtC
Trehalose corynomycolyl transferase C.
  
     0.569
SACE_3318
Possible esterase.
  
     0.552
SACE_1693
Hypothetical protein.
  
     0.521
SACE_2152
Hypothetical protein.
  
     0.517
SACE_2221
Hypothetical protein.
  
     0.487
SACE_4898
Hypothetical protein.
 
     0.486
SACE_1353
Hypothetical protein; Predicted acetyltransferase involved in intracellular survival.
   
    0.463
SACE_2267
Hypothetical protein; Predicted acetyltransferase involved in intracellular survival.
   
    0.463
SACE_3210
Xylose isomerase domain protein TIM barrel.
  
    0.463
SACE_4179
Hypothetical protein; Predicted acetyltransferase involved in intracellular survival.
   
    0.463
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: medium (72%) [HD]