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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3245Hypothetical protein. (86 aa)    
Predicted Functional Partners:
SACE_1222
Membrane-flanked domain protein.
 
  
 0.885
SACE_3246
Hypothetical protein.
       0.561
SACE_6596
Possible transcriptional regulator, TetR family.
 
     0.521
sti1-2
Protease inhibitor precursor; Belongs to the protease inhibitor I16 (SSI) family.
  
     0.492
sti1
Protease inhibitor precursor.
  
     0.454
SACE_0672
Conserved protein (PRC-barrel domain).
  
    0.420
SACE_1044
Probable transmembrane protein.
  
    0.420
SACE_7134
Conserved protein (PRC-barrel domain).
  
    0.420
SACE_3247
Transcriptional regulator, XRE family.
       0.410
SACE_2901
Hypothetical protein.
  
     0.409
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.