Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SACE_3341Glycosyl transferase, family 2. (217 aa)    
Predicted Functional Partners:
SACE_3340
Uncharacterized protein conserved in bacteria.
   
 0.991
SACE_3339
Putative SAM-dependent methyltransferase.
 
   
 0.952
SACE_3342
Integral membrane protein.
 
   
 0.930
galE-3
UDP-glucose 4-epimerase.
 
  
 0.884
SACE_3344
Two-component system sensor kinase.
 
 
 
 0.734
SACE_3338
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
    0.599
resD
Two-component response regulator.
     
 0.547
SACE_3917
Undecaprenyl-phosphate galactosephosphotransferase.
 
  
 0.485
SACE_5692
Hypothetical protein; Glycosyltransferases involved in cell wall biogenesis.
  
   
0.467
SACE_3176
Undecaprenyl-phosphate galactose phosphotransferase.
 
  
 0.465
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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