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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3489Response regulator, two-component system. (217 aa)    
Predicted Functional Partners:
SACE_0145
Two-component system sensor kinase.
 
 
 0.858
SACE_3310
Putative signal transduction histidine kinase.
 
 
 0.805
SACE_5230
Two-component system sensor kinase.
 
 
 0.796
SACE_6703
Two-component system sensor kinase.
 
 
 0.796
SACE_1918
Two-component system sensor kinase.
 
 
 0.793
SACE_3088
Two-component system sensor kinase.
 
 
 0.783
SACE_1659
Two-component system sensor kinase.
 
 
 0.780
SACE_1705
Two component system sensor kinase.
 
 
 0.780
SACE_7263
Two-component system sensor kinase.
 
 0.774
SACE_7250
Hypothetical protein; Signal transduction histidine kinase.
 
 
 0.760
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.