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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaBPutative phenylacetic acid degradation protein. (101 aa)    
Predicted Functional Partners:
paaA1
Phenylacetic acid degradation protein A.
 
 0.998
SACE_3546
Putative phenylacetic acid degradation protein.
 
 0.997
paaD
Probable phenylacetic acid degradation protein.
 
 
 0.997
SACE_3548
Putative phenylacetic acid degradation NADH oxidoreductase.
 
 
 0.996
paaC,
Phenylacetic acid degradation protein.
 
 0.993
paaK
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.982
SACE_3543
Phenylacetic acid degradation protein PaaN.
 
  
 0.978
paaK-2
Phenylacetate-coenzyme A ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.956
echA11
Putative enoyl-CoA hydratase/isomerase family protein.
 
 
 0.936
SACE_3673
Hypothetical protein; Coenzyme F390 synthetase.
 
 
 0.936
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.