Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SACE_3556Probable phthalate 4,5-dioxygenase. (360 aa)    
Predicted Functional Partners:
SACE_2433
NADH-quinone oxidoreductase chain F.
  
 
 0.933
cypD
Bifunctional P-450:NADPH-P450 reductase 1.
 
 0.885
SACE_3555
Possible metal-dependent hydrolase.
     0.874
SACE_3554
Short-chain dehydrogenase/reductase SDR.
  
  
 0.790
SACE_2178
SUF system FeS assembly protein.
  
 0.764
SACE_4139
Type I modular polyketide synthase.
  
 0.763
SACE_3553
Hypothetical protein.
     
 0.762
rhf
Cytochrome P450.
 0.759
SACE_4377
Oxidoreductase FAD-binding region.
  
 
 0.742
pks1-3
Modular polyketide synthase.
  
 0.720
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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