close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3744Protein of unknown function DUF112,transmembrane. (498 aa)    
Predicted Functional Partners:
SACE_3742
Twin-arginine translocation pathway signal.
 
  
 0.970
SACE_5360
Putative tricarboxylic transport membrane protein.
 
  
 0.919
SACE_5358
Integral membrane protein.
  
  
 
0.908
SACE_5359
Integral membrane protein.
 
  
 0.878
SACE_4338
Protein of unknown function DUF112,transmembrane.
  
     0.774
SACE_3745
enoyl-CoA hydratase/carnithine racemase.
       0.773
SACE_3743
Integral membrane protein.
 
     0.770
SACE_3741
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
    0.559
SACE_5362
Two-component system response regulator.
 
     0.547
SACE_2831
TRAP transporter solute receptor, TAXI family.
  
     0.476
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.