STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3752Endoglycoceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. (385 aa)    
Predicted Functional Partners:
SACE_6225
Hypothetical protein.
  
 
 0.742
SACE_0923
Protein of unknown function DUF255.
   
 
 0.708
SACE_2660
Hypothetical protein.
 
   
 0.679
SACE_3751
Protein of unknown function DUF1697.
 
     0.599
SACE_3650
Hypothetical protein.
  
     0.532
SACE_5349
Endonuclease/exonuclease/phosphatase family.
  
     0.526
SACE_5593
Hypothetical protein.
  
     0.510
celA
Endoglucanase; Belongs to the glycosyl hydrolase family 6.
  
 
 0.507
SACE_2800
3-hydroxyisobutyrate dehydrogenase, NAD-binding protein.
  
     0.456
staP
Membrane protein.
  
     0.452
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.