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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3877Beta-lactamase class A-like protein. (252 aa)    
Predicted Functional Partners:
SACE_1373
Beta lactamase.
  
  
  0.922
penA,
Beta-lactamase precursor.
 
  
  0.919
penP
Beta-lactamase precursor.
 
  
  0.918
SACE_5325
Peptidase C45, acyl-coenzyme A/6-aminopenicillanic acid acyl-transferase.
     
  0.900
SACE_3878
Amino acid permease-associated region.
       0.578
SACE_3585
N-acyl-D-amino-acid deacylase.
 
     0.445
SACE_2583
N-acyl-D-amino-acid deacylase.
 
     0.405
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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