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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3963Hypothetical protein. (143 aa)    
Predicted Functional Partners:
SACE_3968
Probable NADPH-dependent fmn reductase oxidoreductase protein.
  
  
  0.974
msuD
Luciferase-like monooxygenase.
 
 0.955
ssuD1
Alkanesulfonate monooxygenase.
 
 0.948
tauD
Taurine dioxygenase, 2-oxoglutarate-dependent.
 
 
  0.929
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
   
 
 0.917
ribF
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
 0.911
nirA
Ferredoxin--nitrite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 
 0.907
SACE_0750
Cob(II)yrinic acid a,c-diamide reductase.
    
 0.903
sseA
3-mercaptopyruvate sulfurtransferase.
    
  0.902
SACE_0288
NADPH-dependent FMN reductase family protein.
     
  0.900
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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