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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_3989enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (254 aa)    
Predicted Functional Partners:
fadB2
3-hydroxyacyl-CoA dehydrogenase.
 0.973
paaH2
3-hydroxybutyryl-CoA dehydrogenase.
 0.955
gcdH2
Putative glutaryl-CoA dehydrogenase.
 
 0.945
fadE7
glutaryl-CoA dehydrogenase.
  
 0.938
SACE_3474
acyl-CoA dehydrogenase.
  
 0.938
SACE_5537
acyl-CoA oxidase.
  
 0.938
acdH
acyl-CoA dehydrogenase.
  
 0.938
SACE_7372
acyl-CoA oxidase.
  
 0.938
SACE_2748
enoyl-CoA hydratase/isomerase-like protein.
 
  
0.931
SACE_5040
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
0.930
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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