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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4013Short-chain dehydrogenase/reductase SDR. (265 aa)    
Predicted Functional Partners:
SACE_4014
Alpha/beta hydrolase fold.
 
   0.782
SACE_4950
Short-chain dehydrogenase/reductase SDR.
  
     0.773
SACE_4758
Short-chain dehydrogenase/reductase SDR.
  
     0.758
SACE_5324
Short chain dehydrogenase/reductase SDR.
 
    0.689
SACE_4012
Major facilitator superfamily MFS_1.
  
    0.665
echA6
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.627
SACE_4016
Carbon monoxide dehydrogenase subunit G.
       0.598
SACE_4017
Carbon-monoxide dehydrogenase.
 
     0.559
SACE_4020
Molybdopterin dehydrogenase, FAD-binding protein.
  
    0.516
SACE_4018
Carbon monoxide dehydrogenase small chain.
       0.502
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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