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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4102Mandelate racemase/muconate lactonizing enzyme. (131 aa)    
Predicted Functional Partners:
SACE_2582
Mandelate racemase/muconate lactonizing enzyme.
  
     0.760
SACE_4937
Mandelate racemase/starvation sensing protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
     0.752
rhmD
Mandelate racemase/muconate lactonizing enzyme; Catalyzes the dehydration of L-rhamnonate to 2-keto-3-deoxy- L-rhamnonate (KDR); Belongs to the mandelate racemase/muconate lactonizing enzyme family. RhamD subfamily.
  
     0.726
SACE_4412
Mandelate racemase/muconate lactonizing enzyme.
  
     0.715
dgoK
2-dehydro-3-deoxygalactonate kinase.
 
  
 0.611
bglA
Beta-glucosidase; Belongs to the glycosyl hydrolase 1 family.
       0.591
SACE_4598
Mandelate racemase/muconate lactonizing enzyme.
  
     0.553
SACE_4841
Mandelate racemase/muconate lactonizing enzyme.
  
     0.457
SACE_2637
KDPG and KHG aldolase.
 
   
 0.433
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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