STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4147Secreted protein. (318 aa)    
Predicted Functional Partners:
SACE_4139
Type I modular polyketide synthase.
  
 
 0.527
SACE_7193
Hypothetical protein.
  
   
 0.525
SACE_7121
Hypothetical protein.
 
   
 0.524
SACE_2630
Modular polyketide synthase.
  
 
 0.500
SACE_4140
Type I modular polyketide synthase.
  
 
 0.500
benE
Benzoate transporter.
       0.498
SACE_4151
Short-chain dehydrogenase/reductase SDR.
  
 
 0.481
pks1-3
Modular polyketide synthase.
  
 
 0.466
SACE_6612
Protein of unknown function DUF156.
     
 0.458
fabG-3
3-oxoacyl-[acyl-carrier-protein] reductase.
  
 
 0.455
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.