Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SACE_4149 | lao2-2 | SACE_4149 | SACE_4150 | Probable amino acid transporter, APC superfamily. | L-amino-acid oxidase. | 0.810 |
SACE_4854 | acuC | SACE_4854 | SACE_1779 | Amine oxidase, flavin-containing. | Acetoin dehydrogenase. | 0.698 |
SACE_4854 | lao2-2 | SACE_4854 | SACE_4150 | Amine oxidase, flavin-containing. | L-amino-acid oxidase. | 0.573 |
SACE_4854 | rppA | SACE_4854 | SACE_1243 | Amine oxidase, flavin-containing. | Putative type III polyketide synthase. | 0.558 |
aao | choD | SACE_0979 | SACE_6705 | D-amino acid oxidase. | Cholesterol oxidase. | 0.484 |
aao | cysC | SACE_0979 | SACE_3527 | D-amino acid oxidase. | Sulfate adenylyltranferase, adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.522 |
aao | lao2-2 | SACE_0979 | SACE_4150 | D-amino acid oxidase. | L-amino-acid oxidase. | 0.514 |
aao | mtr | SACE_0979 | SACE_5978 | D-amino acid oxidase. | Glutathione reductase. | 0.548 |
aao | pteG | SACE_0979 | SACE_6417 | D-amino acid oxidase. | Cholesterol oxidase. | 0.484 |
aao | purB, | SACE_0979 | SACE_7153 | D-amino acid oxidase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.562 |
acuC | SACE_4854 | SACE_1779 | SACE_4854 | Acetoin dehydrogenase. | Amine oxidase, flavin-containing. | 0.698 |
acuC | lao2-2 | SACE_1779 | SACE_4150 | Acetoin dehydrogenase. | L-amino-acid oxidase. | 0.698 |
choD | aao | SACE_6705 | SACE_0979 | Cholesterol oxidase. | D-amino acid oxidase. | 0.484 |
choD | cysC | SACE_6705 | SACE_3527 | Cholesterol oxidase. | Sulfate adenylyltranferase, adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.471 |
choD | lao2-2 | SACE_6705 | SACE_4150 | Cholesterol oxidase. | L-amino-acid oxidase. | 0.486 |
choD | mtr | SACE_6705 | SACE_5978 | Cholesterol oxidase. | Glutathione reductase. | 0.501 |
choD | pteG | SACE_6705 | SACE_6417 | Cholesterol oxidase. | Cholesterol oxidase. | 0.911 |
choD | purB, | SACE_6705 | SACE_7153 | Cholesterol oxidase. | Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. | 0.542 |
cysC | aao | SACE_3527 | SACE_0979 | Sulfate adenylyltranferase, adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | D-amino acid oxidase. | 0.522 |
cysC | choD | SACE_3527 | SACE_6705 | Sulfate adenylyltranferase, adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | Cholesterol oxidase. | 0.471 |
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