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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4242Hypothetical protein. (50 aa)    
Predicted Functional Partners:
pteC
Cytochrome P450 hydroxylase.
 
  
 0.729
SACE_4244
Hypothetical protein.
       0.548
ard
Phosphotransferase (aminonucleoside antibiotic resistance).
  
     0.543
SACE_7227
MerR-family transcriptional regulator.
  
     0.509
SACE_4216
Putative TetR-family transcriptional regulator.
  
     0.507
SACE_1336
Hypothetical protein.
  
     0.478
SACE_1889
Hypothetical protein.
  
     0.476
SACE_0300
Transcriptional regulator, XRE family.
  
     0.474
SACE_4816
Hypothetical protein.
  
     0.467
SACE_0267
Hypothetical protein.
  
     0.463
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.