Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
SACE_4344Mandelate racemase/muconate lactonizing enzyme-like protein. (385 aa)    
Predicted Functional Partners:
dgoK
2-dehydro-3-deoxygalactonate kinase.
 
 
 0.969
SACE_2636
Mandelate racemase/muconate lactonizing enzyme.
 
  
 
0.918
SACE_4345
Hypothetical protein.
 
     0.823
SACE_4346
Hypothetical protein.
       0.732
SACE_2637
KDPG and KHG aldolase.
 
   
 0.665
SACE_4342
Transcriptional regulator, IclR family/regucalcin.
 
   
 0.650
SACE_4347
Putative sodium:solute symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
       0.641
adhA7
Alcohol dehydrogenase.
 
  
 0.634
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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