Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
SACE_4587Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (317 aa)    
Predicted Functional Partners:
SACE_4853
Putative transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.719
SACE_5710
Putative transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.664
SACE_4679
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.639
SACE_2761
Hypothetical protein; Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.626
SACE_3141
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.561
SACE_4588
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
       0.537
SACE_4586
Probable hydrolase.
       0.460
fadE3_2
acyl-CoA dehydrogenase.
  
    0.452
SACE_4585
Probable sulfopyruvate decarboxylase alpha subunit.
 
    0.408
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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