Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
fadE3_2acyl-CoA dehydrogenase. (388 aa)    
Predicted Functional Partners:
fixB
Electron transfer flavoprotein, alpha subunit.
 
 
 0.865
fixA
Electron transfer flavoprotein, beta subunit.
 
 
 0.862
SACE_1823
Probable fatty acid oxidation complex alpha subunit.
  
 0.702
SACE_5040
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
  
 0.702
fadB
Putative 3-hydroxyacyl-CoA dehydrogenase.
  
 0.702
SACE_4588
L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
 
  0.693
SACE_0025
acyl-CoA dehydrogenase domain protein.
  
     0.591
fadB2
3-hydroxyacyl-CoA dehydrogenase.
 
 0.591
paaH2
3-hydroxybutyryl-CoA dehydrogenase.
 
 0.558
SACE_5408
3-hydroxyacyl-CoA dehydrogenase, NAD-binding.
 
 0.540
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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