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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4875Putative maleate cis-trans isomerase. (230 aa)    
Predicted Functional Partners:
SACE_3770
Asp/Glu racemase.
 
  
 
0.931
SACE_1839
Putative maleate cis-trans isomerase.
  
  
 
0.928
sdhA1
Succinate dehydrogenase flavoprotein subunit.
   
 
  0.902
sdhA
Succinate dehydrogenase flavoprotein subunit.
   
 
  0.902
sdhB1
Succinate dehydrogenase iron-sulfur protein.
     
  0.900
sdhC
Putative succinate dehydrogenase membrane subunit.
     
  0.900
SACE_6583
Probable succinate dehydrogenase hydrophobic membrane anchor protein.
     
  0.900
sdhB
Succinate dehydrogenase iron-sulfur protein.
     
  0.900
racX-2
Aspartate racemase; Belongs to the aspartate/glutamate racemases family.
  
  
 0.837
ansB
L-asparaginase II precursor.
  
  
  0.830
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.