STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4879ABC transporter substrate-binding protein. (396 aa)    
Predicted Functional Partners:
SACE_4881
Putative ABC transport protein, ATP-binding component.
 
 
 0.997
SACE_4882
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
SACE_4883
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.997
SACE_4880
ABC transporter ATP-binding protein.
 
 
 0.996
SACE_4632
Amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
SACE_4633
Amino acid ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.993
SACE_4635
ABC transporter ATP-binding protein.
 
 
 0.987
SACE_4631
Putative branched-chain amino acid binding protein.
  
  
 
0.929
livG
Branched-chain amino acid ABC transporter ATP-binding protein.
 
  
 0.908
SACE_5413
ABC transporter, substrate binding protein.
     
  0.900
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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