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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_4892Alpha/beta hydrolase. (291 aa)    
Predicted Functional Partners:
SACE_3905
Hydrolase, alpha/beta fold family.
  
     0.728
SACE_4890
MFS transporter, DHA1 family.
    
 0.722
SACE_4014
Alpha/beta hydrolase fold.
  
     0.672
SACE_6242
Alpha/beta hydrolase fold.
  
     0.617
SACE_5137
Oxidoreductase.
  
     0.614
SACE_4736
Oxidoreductase.
  
     0.604
cpo,
Non-heme chloroperoxidase.
  
     0.588
SACE_4891
MFS transporter, DHA1 family.
     
 0.587
SACE_1924
Hydrolase.
  
     0.567
SACE_6290
Similar to hydrolase or acyltransferase (alpha/beta hydrolase superfamily).
  
     0.557
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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