STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_5035Transposase, IS4. (309 aa)    
Predicted Functional Partners:
pglY
Bacteriophage (phiC31) resistance gene PglY.
  
  
 0.665
SACE_5132
Similar to superfamily I DNA and RNA helicases and helicase subunits.
  
    0.578
SACE_2301
Uncharacterized protein containing caspase domain.
  
    0.571
SACE_5187
Myo-inositol catabolism IolB protein.
   
    0.566
SACE_5031
ATPase.
  
    0.556
SACE_5037
Transposase.
 
     0.516
SACE_5036
Hypothetical protein.
       0.499
SACE_5034
Hypothetical protein.
       0.407
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.