STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SACE_5151Hypothetical protein. (198 aa)    
Predicted Functional Partners:
SACE_4020
Molybdopterin dehydrogenase, FAD-binding protein.
 
  
 0.566
SACE_1160
Carbon monoxide dehydrogenase, medium chain.
 
  
 0.538
SACE_4874
Carbon monoxide dehydrogenase medium subunit.
 
  
 0.537
SACE_1264
Molybdopterin dehydrogenase, FAD-binding protein.
 
  
 0.531
SACE_0538
Carbon monoxide dehydrogenase medium subunit.
 
  
 0.530
SACE_1257
Uncharacterized MobA-related protein.
  
  
 0.501
SACE_0445
Conserved hypothetical protein (putative membrane protein).
 
     0.463
xdhB
Xanthine dehydrogenase FAD-binding subunit.
  
  
 0.445
yagS
Putative oxidoreductase, FAD-binding domain.
  
  
 0.445
SACE_4619
Molybdopterin dehydrogenase, FAD-binding.
  
  
 0.445
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.