STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nanHNeuraminidase. (616 aa)    
Predicted Functional Partners:
SACE_1663
Exo-alpha-sialidase.
  
  
 
0.911
agaB2
Putative alpha-galactosidase.
     
  0.900
agaB2-2
Putative alpha-galactosidase.
     
  0.900
SACE_5160
Short-chain dehydrogenase/reductase SDR.
       0.773
dapAch1
Dihydrodipicolinate synthase protein; Belongs to the DapA family.
   
 0.743
bga2
Putative beta-galactosidase.
  
 0.694
SACE_6314
Twin-arginine translocation pathway signal; Glycosidase.
 
   
 0.625
SACE_5103
Type III restriction enzyme, res subunit.
   
  
 0.564
SACE_0545
ATP-dependent DNA helicase.
   
    0.552
SACE_1795
Type III restriction enzyme, res subunit.
   
    0.552
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.