STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gdhNADP-specific glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (446 aa)    
Predicted Functional Partners:
gltB
Putative glutamate synthase(NADPH) large subunit.
  
 0.999
gltB-2
Putative glutamate synthase(NADPH) large subunit.
  
 0.999
glnA-1
Glutamine synthetase.
  
 
 0.972
SACE_3095
Glutamine synthetase (glutamate--ammonia ligase).
  
 
 0.965
glnA4
Putative glutamine synthetase.
  
 
 0.964
glnA2
Glutamine synthetase.
  
 
 0.961
SACE_3997
Glutamate synthase, NADH/NADPH, small subunit 1.
  
 0.932
SACE_5741
Glutamate synthase, NADH/NADPH, small subunit 1.
  
 0.932
dghA
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 
0.927
gdhA1
Glutamate dehydrogenase (NAD(P)+); Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
  
 
0.927
Your Current Organism:
Saccharopolyspora erythraea
NCBI taxonomy Id: 405948
Other names: S. erythraea NRRL 2338, Saccharopolyspora erythraea ATCC 11635, Saccharopolyspora erythraea DSM 40517, Saccharopolyspora erythraea JCM 4748, Saccharopolyspora erythraea NRRL 2338, Saccharopolyspora erythraea str. NRRL 2338, Saccharopolyspora erythraea strain NRRL 2338
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