Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SACE_5940 | SACE_6063 | SACE_5940 | SACE_6063 | Protein of unknown function DUF328; Belongs to the UPF0246 family. | Cyanate MFS transporter. | 0.609 |
SACE_6063 | SACE_5940 | SACE_6063 | SACE_5940 | Cyanate MFS transporter. | Protein of unknown function DUF328; Belongs to the UPF0246 family. | 0.609 |
SACE_6063 | SACE_6064 | SACE_6063 | SACE_6064 | Cyanate MFS transporter. | Transcriptional regulator, GntR family. | 0.654 |
SACE_6063 | SACE_6065 | SACE_6063 | SACE_6065 | Cyanate MFS transporter. | Putative muramoyl-pentapeptide carboxypeptidase. | 0.416 |
SACE_6063 | amt | SACE_6063 | SACE_6062 | Cyanate MFS transporter. | Ammonium transporter. | 0.501 |
SACE_6063 | glnB | SACE_6063 | SACE_6061 | Cyanate MFS transporter. | Nitrogen regulatory protein PII; Belongs to the P(II) protein family. | 0.501 |
SACE_6064 | SACE_6063 | SACE_6064 | SACE_6063 | Transcriptional regulator, GntR family. | Cyanate MFS transporter. | 0.654 |
SACE_6064 | SACE_6065 | SACE_6064 | SACE_6065 | Transcriptional regulator, GntR family. | Putative muramoyl-pentapeptide carboxypeptidase. | 0.489 |
SACE_6064 | amt | SACE_6064 | SACE_6062 | Transcriptional regulator, GntR family. | Ammonium transporter. | 0.433 |
SACE_6064 | glnB | SACE_6064 | SACE_6061 | Transcriptional regulator, GntR family. | Nitrogen regulatory protein PII; Belongs to the P(II) protein family. | 0.426 |
SACE_6065 | SACE_6063 | SACE_6065 | SACE_6063 | Putative muramoyl-pentapeptide carboxypeptidase. | Cyanate MFS transporter. | 0.416 |
SACE_6065 | SACE_6064 | SACE_6065 | SACE_6064 | Putative muramoyl-pentapeptide carboxypeptidase. | Transcriptional regulator, GntR family. | 0.489 |
amt | SACE_6063 | SACE_6062 | SACE_6063 | Ammonium transporter. | Cyanate MFS transporter. | 0.501 |
amt | SACE_6064 | SACE_6062 | SACE_6064 | Ammonium transporter. | Transcriptional regulator, GntR family. | 0.433 |
amt | glnB | SACE_6062 | SACE_6061 | Ammonium transporter. | Nitrogen regulatory protein PII; Belongs to the P(II) protein family. | 0.999 |
glnB | SACE_6063 | SACE_6061 | SACE_6063 | Nitrogen regulatory protein PII; Belongs to the P(II) protein family. | Cyanate MFS transporter. | 0.501 |
glnB | SACE_6064 | SACE_6061 | SACE_6064 | Nitrogen regulatory protein PII; Belongs to the P(II) protein family. | Transcriptional regulator, GntR family. | 0.426 |
glnB | amt | SACE_6061 | SACE_6062 | Nitrogen regulatory protein PII; Belongs to the P(II) protein family. | Ammonium transporter. | 0.999 |