STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934765_00086Unannotated protein. (125 aa)    
Predicted Functional Partners:
GCA_000934765_02057
Unannotated protein.
  
   0.983
GCA_000934765_02054
Unannotated protein.
  
   0.980
GCA_000934765_02556
Unannotated protein.
   
   0.979
GCA_000934765_02461
Unannotated protein.
   
   0.962
GCA_000934765_02050
Unannotated protein.
   
   0.961
GCA_000934765_02462
Unannotated protein.
   
   0.959
GCA_000934765_02000
Unannotated protein.
   
   0.950
GCA_000934765_02049
Unannotated protein.
   
   0.949
GCA_000934765_02055
Unannotated protein.
  
   0.949
GCA_000934765_02058
Unannotated protein.
  
   0.946
Your Current Organism:
Thiomicrospira microaerophila
NCBI taxonomy Id: 406020
Other names: DSM 17327, T. microaerophila, Thioalkalimicrobium microaerophilum, Thioalkalimicrobium microaerophilum Sorokin et al. 2007, Thiomicrospira microaerophila (Sorokin et al. 2007) Boden et al. 2017, UNIQEM U242, gamma proteobacterium ASL8.2, strain ASL8-2
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.