STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000934765_01678Unannotated protein. (148 aa)    
Predicted Functional Partners:
GCA_000934765_01677
Unannotated protein.
 
 
 0.996
GCA_000934765_01520
Unannotated protein.
 
 
 0.994
GCA_000934765_01519
Unannotated protein.
 
 
 0.989
GCA_000934765_01160
Unannotated protein.
  
 
 0.985
GCA_000934765_01479
Unannotated protein.
  
 
 0.985
GCA_000934765_01674
Unannotated protein.
 
 
 0.984
GCA_000934765_01672
Unannotated protein.
 
 
 0.982
GCA_000934765_01673
Unannotated protein.
 
 
 0.981
GCA_000934765_00381
Unannotated protein.
 
 
 0.979
GCA_000934765_01144
Unannotated protein.
 
 
 0.970
Your Current Organism:
Thiomicrospira microaerophila
NCBI taxonomy Id: 406020
Other names: DSM 17327, T. microaerophila, Thioalkalimicrobium microaerophilum, Thioalkalimicrobium microaerophilum Sorokin et al. 2007, Thiomicrospira microaerophila (Sorokin et al. 2007) Boden et al. 2017, UNIQEM U242, gamma proteobacterium ASL8.2, strain ASL8-2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.