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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO50365.1Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. (615 aa)    
Predicted Functional Partners:
SEO50407.1
L-lactate dehydrogenase complex protein LldF.
 
  
 0.854
SEO42347.1
Lactate 2-monooxygenase.
 
  
 0.819
SEO81008.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
 
  
 0.819
SEO75709.1
Membrane protein.
 
      0.682
SEO50427.1
L-lactate dehydrogenase complex protein LldE.
 
  
 0.623
SEO50386.1
L-lactate dehydrogenase complex protein LldG.
 
  
 0.597
SEO56131.1
Glycolate oxidase iron-sulfur subunit.
 
  
 0.552
SEP15600.1
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
  
 0.548
SEO78786.1
Formate dehydrogenase.
      
 0.463
SEP04964.1
L-lactate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
  
 0.455
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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