STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO53521.1Uncharacterized conserved protein, DUF934 family. (170 aa)    
Predicted Functional Partners:
SEO53504.1
Sulfite reductase (NADPH) hemoprotein beta-component.
 
 0.996
SEO99805.1
precorrin-3B synthase.
  
 
 0.826
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
 
  0.689
cysH
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
  
  
 0.565
SEO53486.1
Hypothetical protein.
       0.494
SEO56145.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
 0.468
SEP12356.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
    
 0.468
SEO51433.1
uroporphyrin-III C-methyltransferase.
  
    0.405
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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