STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO65549.1LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family. (309 aa)    
Predicted Functional Partners:
SEO45014.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.713
SEO55892.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.709
SEO73757.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.687
SEO78725.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.657
SEO65583.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.634
SEO47755.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.609
SEO65569.1
Organic hydroperoxide reductase OsmC/OhrA.
 
   
 0.576
SEO66203.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.546
SEP00279.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.543
SEO55660.1
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.526
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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