STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO71613.1Transcriptional regulator, XRE family with cupin sensor. (212 aa)    
Predicted Functional Partners:
SEO71639.1
N-methylglutamate synthase subunit C precursor; Belongs to the glutamate synthase family.
 
     0.952
SEO71674.1
N-methylglutamate synthase subunit A.
 
   
 0.952
SEO71654.1
N-methylglutamate synthase subunit B.
 
     0.951
SEO71687.1
Gamma-glutamylmethylamide synthetase; Belongs to the glutamine synthetase family.
 
  
 0.914
SEO71744.1
Sarcosine oxidase subunit delta.
 
     0.910
SEO71724.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
 
  
 0.888
argA
N-acetylglutamate synthase; Belongs to the acetyltransferase family. ArgA subfamily.
    
  0.885
SEO71759.1
N-methylglutamate dehydrogenase subunit A precursor.
 
  
 0.811
SEO69821.1
Chorismate mutase.
  
 
 0.730
SEO47271.1
Hypothetical protein.
 
     0.726
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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