STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO65429.1Two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB. (615 aa)    
Predicted Functional Partners:
SEO80628.1
PAS domain S-box-containing protein.
 
0.995
SEO65459.1
Two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD.
 
 0.958
SEO51985.1
Two-component system, NarL family, sensor histidine kinase BarA.
 
0.945
SEP11162.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 0.936
SEO56801.1
Hpt sensor hybrid histidine kinase.
0.924
SEO80001.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.922
SEO88935.1
PAS domain S-box-containing protein.
  
 0.912
SEO56670.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
0.859
SEO56469.1
PAS domain S-box-containing protein.
 
 
 0.839
SEP19057.1
Two component transcriptional regulator, LuxR family.
 
 0.746
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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