STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO81103.1Uncharacterized domain 1-containing protein. (155 aa)    
Predicted Functional Partners:
SEO81084.1
Hypothetical protein.
 
     0.888
SEO81126.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
     0.745
SEO70498.1
TRAP transporter solute receptor, TAXI family.
  
     0.622
SEO70418.1
Transcriptional regulator, IclR family.
 
     0.620
SEO70477.1
TRAP transporter solute receptor, TAXI family.
  
     0.616
SEO47293.1
Ferredoxin-NADP reductase.
  
 
  0.575
SEO81050.1
TRAP transporter solute receptor, TAXI family.
  
     0.574
SEO81141.1
acyl-CoA dehydrogenase.
       0.516
SEO72218.1
pimeloyl-CoA dehydrogenase, large subunit.
  
     0.494
SEO65871.1
Biotin/methionine sulfoxide reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
  
  0.454
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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