STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO81126.1Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. (527 aa)    
Predicted Functional Partners:
SEO48195.1
Hypothetical protein.
 
  
  0.921
SEO78786.1
Formate dehydrogenase.
    
   0.914
SEO52460.1
3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.
 
 
 
 0.830
SEO81141.1
acyl-CoA dehydrogenase.
 
 
  0.810
SEO81084.1
Hypothetical protein.
 
     0.777
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.776
SEO83014.1
Hypothetical protein; Belongs to the cytochrome P450 family.
 
 
 0.764
SEO81103.1
Uncharacterized domain 1-containing protein.
 
     0.745
SEO81182.1
glutaryl-CoA dehydrogenase.
 
 
  0.682
SEO51985.1
Two-component system, NarL family, sensor histidine kinase BarA.
     
 0.668
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.