STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO82663.1Hypothetical protein. (190 aa)    
Predicted Functional Partners:
SEO82791.1
Carbon-monoxide dehydrogenase medium subunit.
 
 
 0.901
SEO82754.1
Carbon-monoxide dehydrogenase large subunit.
 
 0.884
SEO72434.1
Carbon monoxide dehydrogenase, medium subunit.
 
 
 0.827
SEO72357.1
Uncharacterized conserved protein, contains von Willebrand factor type A (vWA) domain.
 
     0.786
SEO72375.1
MoxR-like ATPase.
 
     0.753
SEO82578.1
Molybdenum cofactor cytidylyltransferase.
 
     0.741
SEO82547.1
XdhC and CoxI family protein.
 
     0.722
SEO82682.1
TRAP transporter, DctM subunit.
       0.709
SEO82713.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.709
SEP03929.1
MoxR-like ATPase.
 
     0.705
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.