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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO82862.1Two component transcriptional regulator, LytTR family. (249 aa)    
Predicted Functional Partners:
SEO82883.1
Histidine kinase.
 
 0.989
SEP01283.1
Two-component system, LytT family, sensor histidine kinase AlgZ.
 
 
 0.937
SEO82904.1
Uncharacterized membrane protein.
  
    0.799
SEO82928.1
Carotenoid cleavage dioxygenase.
       0.773
SEO82939.1
Uncharacterized conserved protein, DUF2141 family.
       0.760
proA
Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.
    
   0.709
SEO72450.1
Transcriptional regulator, LytTR family.
  
     0.652
SEO51985.1
Two-component system, NarL family, sensor histidine kinase BarA.
    
 0.628
SEO80628.1
PAS domain S-box-containing protein.
 
 
 0.612
SEO93009.1
Twitching motility two-component system response regulator PilG.
  
  
 0.542
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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