STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO83279.1Cytochrome c553. (105 aa)    
Predicted Functional Partners:
SEO71724.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
   
 0.858
SEP06956.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
   
 0.858
SEO46021.1
Cytochrome c oxidase cbb3-type subunit 2.
 
 0.857
SEO46000.1
Cytochrome c oxidase cbb3-type subunit 1; Belongs to the heme-copper respiratory oxidase family.
  
 0.807
SEO83297.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
 
  
  0.767
SEO74896.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
 
 
 0.715
SEO67224.1
Cytochrome c553.
 
    0.702
SEO48401.1
Cytochrome c oxidase subunit 2.
    
 0.654
SEO90413.1
Cytochrome c oxidase subunit 2.
    
 0.654
SEO74928.1
Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.
 
  
 0.640
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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