STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO83765.1Isoquinoline 1-oxidoreductase, alpha subunit. (149 aa)    
Predicted Functional Partners:
SEO83754.1
Isoquinoline 1-oxidoreductase, beta subunit.
 0.999
SEO72395.1
Carbon monoxide dehydrogenase, large subunit apoprotein.
 0.998
SEO82754.1
Carbon-monoxide dehydrogenase large subunit.
 0.998
SEO72434.1
Carbon monoxide dehydrogenase, medium subunit.
 0.997
SEO82791.1
Carbon-monoxide dehydrogenase medium subunit.
 0.985
SEO82411.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
  
  0.971
SEO82564.1
Xanthine dehydrogenase accessory factor.
 
 
 0.856
SEO66987.1
Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase subunit (chain I).
    
 0.771
SEO82547.1
XdhC and CoxI family protein.
 
 
 0.744
SEO72339.1
Xanthine dehydrogenase accessory factor.
 
 
 0.728
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.