STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO83990.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
SEO84005.1
Hypothetical protein.
     0.973
SEO46840.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
     0.592
cysC
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
    
 0.574
SEO47719.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
   
 0.530
SEO71724.1
N-methylglutamate dehydrogenase subunit C; Belongs to the GcvT family.
  
 
 0.529
SEP06956.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.529
SEO84020.1
Putative restriction endonuclease.
 
     0.521
SEO58721.1
Hypothetical protein.
  
     0.502
SEO42892.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
 
     0.453
SEP14840.1
Sulfotransferase family protein.
  
     0.432
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.