STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO97629.1ThiF family protein. (286 aa)    
Predicted Functional Partners:
SEO67080.1
Molybdopterin or thiamine biosynthesis adenylyltransferase.
 
0.949
SEO97643.1
N-acyl amino acid synthase, PEP-CTERM/exosortase system-associated.
 
     0.932
SEO97529.1
Putative PEP-CTERM system histidine kinase.
 
     0.759
SEO97678.1
Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily.
  
     0.755
SEO98141.1
Probable O-glycosylation ligase, exosortase A-associated.
 
     0.753
SEO97707.1
Uncharacterized protein, PEP-CTERM system associated.
  
     0.751
SEO97777.1
Exosortase A.
  
     0.751
SEO97749.1
FemAB-related protein, PEP-CTERM system-associated.
  
     0.745
SEO97493.1
Trypsin-like peptidase domain-containing protein.
 
    0.742
SEO97558.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
 
     0.740
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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