Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO51332.1 | SEO56487.1 | SAMN04488052_101463 | SAMN04488052_101724 | DNA translocase FtsK. | Chromosome partitioning protein. | 0.534 |
SEO51332.1 | SEO56947.1 | SAMN04488052_101463 | SAMN04488052_101747 | DNA translocase FtsK. | Chromosome partitioning protein. | 0.553 |
SEO51332.1 | SEP00466.1 | SAMN04488052_101463 | SAMN04488052_10662 | DNA translocase FtsK. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.781 |
SEO51332.1 | SEP00480.1 | SAMN04488052_101463 | SAMN04488052_10663 | DNA translocase FtsK. | Chromosome partitioning protein. | 0.634 |
SEO51332.1 | dnaA | SAMN04488052_101463 | SAMN04488052_10669 | DNA translocase FtsK. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.622 |
SEO55913.1 | SEP00466.1 | SAMN04488052_101691 | SAMN04488052_10662 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.713 |
SEO56487.1 | SEO51332.1 | SAMN04488052_101724 | SAMN04488052_101463 | Chromosome partitioning protein. | DNA translocase FtsK. | 0.534 |
SEO56487.1 | SEO84219.1 | SAMN04488052_101724 | SAMN04488052_103315 | Chromosome partitioning protein. | Chromosome partitioning related protein ParA. | 0.724 |
SEO56487.1 | SEP00466.1 | SAMN04488052_101724 | SAMN04488052_10662 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.938 |
SEO56487.1 | dnaA | SAMN04488052_101724 | SAMN04488052_10669 | Chromosome partitioning protein. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.486 |
SEO56947.1 | SEO51332.1 | SAMN04488052_101747 | SAMN04488052_101463 | Chromosome partitioning protein. | DNA translocase FtsK. | 0.553 |
SEO56947.1 | SEP00466.1 | SAMN04488052_101747 | SAMN04488052_10662 | Chromosome partitioning protein. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.943 |
SEO56947.1 | dnaA | SAMN04488052_101747 | SAMN04488052_10669 | Chromosome partitioning protein. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.453 |
SEO84219.1 | SEO56487.1 | SAMN04488052_103315 | SAMN04488052_101724 | Chromosome partitioning related protein ParA. | Chromosome partitioning protein. | 0.724 |
SEO84219.1 | SEP00466.1 | SAMN04488052_103315 | SAMN04488052_10662 | Chromosome partitioning related protein ParA. | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | 0.885 |
SEO84219.1 | SEP00480.1 | SAMN04488052_103315 | SAMN04488052_10663 | Chromosome partitioning related protein ParA. | Chromosome partitioning protein. | 0.722 |
SEO84219.1 | dnaA | SAMN04488052_103315 | SAMN04488052_10669 | Chromosome partitioning related protein ParA. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.480 |
SEP00466.1 | SEO51332.1 | SAMN04488052_10662 | SAMN04488052_101463 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | DNA translocase FtsK. | 0.781 |
SEP00466.1 | SEO55913.1 | SAMN04488052_10662 | SAMN04488052_101691 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | Chromosome partitioning protein. | 0.713 |
SEP00466.1 | SEO56487.1 | SAMN04488052_10662 | SAMN04488052_101724 | Chromosome partitioning protein, ParB family; Belongs to the ParB family. | Chromosome partitioning protein. | 0.938 |
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