STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP03027.13-oxoacyl-[acyl-carrier-protein] reductase. (240 aa)    
Predicted Functional Partners:
SEP07614.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
    
0.923
SEP04055.1
Polyhydroxyalkanoate synthase.
  
  
  0.854
SEO88949.1
CDP-4-dehydro-6-deoxyglucose reductase.
  
 0.793
SEO66817.1
Polyhydroxyalkanoate synthase.
  
  
 0.767
SEO52509.1
[acyl-carrier-protein] S-malonyltransferase.
 0.766
SEO47293.1
Ferredoxin-NADP reductase.
   
 0.762
SEO89793.1
Glutamate synthase (NADPH/NADH) large chain.
     
 0.762
SEP16433.1
Polyhydroxyalkanoate synthase.
  
  
 0.762
SEO70022.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
     0.719
SEO43862.1
3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
  0.707
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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