STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP03806.1D-lactate dehydrogenase (cytochrome). (471 aa)    
Predicted Functional Partners:
SEO78786.1
Formate dehydrogenase.
   
   0.917
SEO56111.1
Glycolate oxidase FAD binding subunit.
  
 
0.797
SEP03793.1
Uncharacterized conserved protein YaaN involved in tellurite resistance.
       0.773
SEO56131.1
Glycolate oxidase iron-sulfur subunit.
 
 0.756
SEO46057.1
Cytochrome c oxidase cbb3-type subunit 3; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.
   
 0.753
SEP03781.1
Hypothetical protein.
       0.746
SEO91645.1
Glucose/arabinose dehydrogenase, beta-propeller fold.
    
 0.744
SEO89793.1
Glutamate synthase (NADPH/NADH) large chain.
    
 0.739
SEO81008.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
 0.734
SEO42347.1
Lactate 2-monooxygenase.
 0.731
Your Current Organism:
Aquisalimonas asiatica
NCBI taxonomy Id: 406100
Other names: A. asiatica, Aquisalimonas asiatica Marquez et al. 2007, CCM 7368, CECT 7151, CGMCC 1.6291, DSM 18102, strain CG12
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