Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEO67349.1 | SEP01349.1 | SAMN04488052_102110 | SAMN04488052_106127 | Hypothetical protein. | HemY protein. | 0.477 |
SEO67349.1 | SEP13338.1 | SAMN04488052_102110 | SAMN04488052_11184 | Hypothetical protein. | Membrane protein required for beta-lactamase induction. | 0.510 |
SEO67349.1 | SEP13424.1 | SAMN04488052_102110 | SAMN04488052_11191 | Hypothetical protein. | Protein of unknown function. | 0.426 |
SEO75370.1 | SEO88740.1 | SAMN04488052_102621 | SAMN04488052_10465 | TIGR02099 family protein. | Sporulation related domain-containing protein. | 0.500 |
SEO75370.1 | SEP01335.1 | SAMN04488052_102621 | SAMN04488052_106126 | TIGR02099 family protein. | Uroporphyrin-3 C-methyltransferase. | 0.566 |
SEO75370.1 | SEP13338.1 | SAMN04488052_102621 | SAMN04488052_11184 | TIGR02099 family protein. | Membrane protein required for beta-lactamase induction. | 0.512 |
SEO75370.1 | SEP14891.1 | SAMN04488052_102621 | SAMN04488052_11285 | TIGR02099 family protein. | Uncharacterized conserved protein, contains Zn-finger domain. | 0.601 |
SEO88740.1 | SEO75370.1 | SAMN04488052_10465 | SAMN04488052_102621 | Sporulation related domain-containing protein. | TIGR02099 family protein. | 0.500 |
SEO88740.1 | SEP01335.1 | SAMN04488052_10465 | SAMN04488052_106126 | Sporulation related domain-containing protein. | Uroporphyrin-3 C-methyltransferase. | 0.564 |
SEO88740.1 | SEP01349.1 | SAMN04488052_10465 | SAMN04488052_106127 | Sporulation related domain-containing protein. | HemY protein. | 0.524 |
SEO88740.1 | SEP13338.1 | SAMN04488052_10465 | SAMN04488052_11184 | Sporulation related domain-containing protein. | Membrane protein required for beta-lactamase induction. | 0.553 |
SEP01335.1 | SEO75370.1 | SAMN04488052_106126 | SAMN04488052_102621 | Uroporphyrin-3 C-methyltransferase. | TIGR02099 family protein. | 0.566 |
SEP01335.1 | SEO88740.1 | SAMN04488052_106126 | SAMN04488052_10465 | Uroporphyrin-3 C-methyltransferase. | Sporulation related domain-containing protein. | 0.564 |
SEP01335.1 | SEP01349.1 | SAMN04488052_106126 | SAMN04488052_106127 | Uroporphyrin-3 C-methyltransferase. | HemY protein. | 0.981 |
SEP01335.1 | SEP13338.1 | SAMN04488052_106126 | SAMN04488052_11184 | Uroporphyrin-3 C-methyltransferase. | Membrane protein required for beta-lactamase induction. | 0.605 |
SEP01349.1 | SEO67349.1 | SAMN04488052_106127 | SAMN04488052_102110 | HemY protein. | Hypothetical protein. | 0.477 |
SEP01349.1 | SEO88740.1 | SAMN04488052_106127 | SAMN04488052_10465 | HemY protein. | Sporulation related domain-containing protein. | 0.524 |
SEP01349.1 | SEP01335.1 | SAMN04488052_106127 | SAMN04488052_106126 | HemY protein. | Uroporphyrin-3 C-methyltransferase. | 0.981 |
SEP01349.1 | SEP13338.1 | SAMN04488052_106127 | SAMN04488052_11184 | HemY protein. | Membrane protein required for beta-lactamase induction. | 0.552 |
SEP13338.1 | SEO67349.1 | SAMN04488052_11184 | SAMN04488052_102110 | Membrane protein required for beta-lactamase induction. | Hypothetical protein. | 0.510 |
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