STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000175075_00871Unannotated protein. (419 aa)    
Predicted Functional Partners:
GCA_000175075_01079
Unannotated protein.
  
  
 0.907
GCA_000175075_00630
Unannotated protein.
 
     0.716
GCA_000175075_00729
Unannotated protein.
  
  
 
0.689
GCA_000175075_03827
Unannotated protein.
  
     0.668
GCA_000175075_02259
Unannotated protein.
    
   0.662
GCA_000175075_02038
Unannotated protein.
  
     0.652
GCA_000175075_01159
Unannotated protein.
  
     0.648
GCA_000175075_01268
Unannotated protein.
  
     0.642
GCA_000175075_02738
Unannotated protein.
  
     0.640
GCA_000175075_03248
Unannotated protein.
  
     0.633
Your Current Organism:
Bacillus sp. m313
NCBI taxonomy Id: 406124
Other names: B. sp. m3-13, Bacillus sp. m3-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.