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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR54969.1TIGRFAM: putative methylase; PFAM: methyltransferase small; KEGG: mmp:MMP0054 hypothetical protein. (202 aa)    
Predicted Functional Partners:
ABR54968.1
PFAM: protein of unknown function DUF34; KEGG: mmp:MMP0053 hypothetical protein.
 
    0.917
ABR54272.1
PFAM: H+transporting two-sector ATPase C subunit; KEGG: mmp:MMP1040 A1A0 ATPase, subunit K; Belongs to the V-ATPase proteolipid subunit family.
  
   0.881
prf1
Peptide chain release factor eRF/aRF, subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
   
 0.863
hisS
TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: mmp:MMP1614 histidyl-tRNA synthetase; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
  
 0.700
ABR54970.1
PFAM: PUA domain containing protein; KEGG: mmp:MMP0055 PUA domain protein.
 
     0.693
trm1
N2,N2-dimethylguanosine tRNA methyltransferase; Dimethylates a single guanine residue at position 26 of a number of tRNAs using S-adenosyl-L-methionine as donor of the methyl groups; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
    
 
 0.661
ABR55086.1
TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: mmp:MMP0186 hypothetical protein.
  
  
 0.629
nadK
ATP-NAD/AcoX kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
 
  
 0.614
ABR54005.1
PFAM: TPR repeat-containing protein; heat shock protein DnaJ domain protein; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide domain protein; KEGG: pfa:PFL1930w hypothetical protein.
     
 0.578
ABR54352.1
PFAM: GTP-binding protein HSR1-related; TGS domain protein; GTPase of unknown function-like; KEGG: mmp:MMP1122 GTP1/OBG family:ATP/GTP-binding site motif A (P-loop):TGS domain.
  
  
 0.553
Your Current Organism:
Methanococcus vannielii
NCBI taxonomy Id: 406327
Other names: M. vannielii SB, Methanococcus vannielii SB, Methanococcus vannielii str. SB, Methanococcus vannielii strain SB
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