STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR55292.1PFAM: CBS domain containing protein; KEGG: mmp:MMP0407 hypothetical protein. (137 aa)    
Predicted Functional Partners:
ABR54549.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmp:MMP1332 NAD binding site:FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
  
 
 0.781
ABR55186.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP0278 hypothetical protein.
  
     0.672
ABR54254.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP1016 hypothetical protein.
 
    0.650
ABR54166.1
CheC, inhibitor of MCP methylation; KEGG: mmp:MMP0932 probable chemotaxis-related protein.
    
 
 0.614
ABR54167.1
CheC, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: mmp:MMP0931 putative chemotaxis protein CheC.
    
 
 0.614
ABR55293.1
KEGG: mmp:MMP0408 H+-transporting two-sector ATPase, A subunit.
 
     0.586
ABR54850.1
TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; KEGG: mmp:MMP1642 ATP/GTP-binding site motif A (P-loop):small GTP-binding protein domain.
  
 0.581
ABR55303.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; KEGG: mmp:MMP0420 CBS domain related protein.
 
     0.557
ABR54810.1
PFAM: domain of unknown function DUF1743; KEGG: mmp:MMP1593 hypothetical protein.
       0.475
ABR54967.1
Putative signal transduction protein with CBS domains; PFAM: CBS domain containing protein; Protein of unknown function DUF293, archaea; Helix-turn-helix type 11 domain protein; KEGG: mmp:MMP0052 hypothetical protein.
 
    0.452
Your Current Organism:
Methanococcus vannielii
NCBI taxonomy Id: 406327
Other names: M. vannielii SB, Methanococcus vannielii SB, Methanococcus vannielii str. SB, Methanococcus vannielii strain SB
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.